3F0I Oxidoreductase date Oct 24, 2008
title Arsenate Reductase From Vibrio Cholerae.
authors J.Osipiuk, M.Gu, J.Stam, W.F.Anderson, A.Joachimiak, Center For S Genomics Of Infectious Diseases (Csgid)
compound source
Molecule: Arsenate Reductase
Chain: A, B
Engineered: Yes
 Organism_scientific: Vibrio Cholerae
Organism_taxid: 666
Strain: O1 Biovar Eltor Str. N16961
Gene: Vc2165, Vc_2165
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 64 2 2
R_factor 0.166 R_Free 0.189
crystal
cell
length a length b length c angle alpha angle beta angle gamma
118.704 118.704 110.013 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.88 Å
ligand MLI, MSE, NA enzyme
Gene VC
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (52 Kb) [Save to disk]
  • Biological Unit Coordinates (3f0i.pdb1.gz) 23 Kb
  • Biological Unit Coordinates (3f0i.pdb2.gz) 24 Kb
  • LPC: Ligand-Protein Contacts for 3F0I
  • CSU: Contacts of Structural Units for 3F0I
  • Likely Quarternary Molecular Structure file(s) for 3F0I
  • Structure Factors (646 Kb)
  • Retrieve 3F0I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3F0I from S2C, [Save to disk]
  • Re-refined 3f0i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3F0I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3F0I
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3F0I, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3f0i_A] [3f0i_B] [3f0i]
  • SWISS-PROT database: [Q9KQ39]
  • Domain organization of [Q9KQ39_VIBCH] by SWISSPFAM
    • Other resources with information on 3F0I
  • Community annotation for 3F0I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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