3FAL	Signaling Protein	date	Nov 17, 2008
title	Humanrxr Alpha & Mouse Lxr Alpha Complexed With Retenoic Aci Gsk2186
authors	E.Y.Chao, J.A.Caravella, M.A.Watson, N.Campobasso, S.Ghisletti, A.N.Billin, C.Galardi, T.M.Willson, W.J.Zuercher, J.L.Collins
compound		source
Molecule: Retinoic Acid Receptor Rxr-Alpha Chain: A, C Fragment: Residues 225-462 Synonym: Retinoid X Receptor Alpha, Nuclear Receptor Subfam Group B Member 1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Rxra, Nr2b1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: T7rxralbd_-Pacyc184, Prseta-H6.- Thr.Mlxra2-00-455;
Molecule: Oxysterols Receptor Lxr-Alpha Chain: B, D Fragment: Residues 200-445 Synonym: Liver X Receptor Alpha, Nuclear Orphan Receptor Lx Nuclear Receptor Subfamily 1 Group H Member 3; Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Nr1h3, Lxra Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: T7rxralbd_-Pacyc184, Prseta-H6.- Thr.Mlxra2-00-455
symmetry	Space Group: C 1 2 1	R_factor 0.219 R_Free 0.278
crystal cell	length a length b length c angle alpha angle beta angle gamma 123.212 90.002 101.311 90.00 111.88 90.00
method	X-Ray Diffraction	resolution	2.36 Å
ligand	LO2, REA BindingDB	enzyme
Gene Ontology	Chain Function Process Component A, C D, B
Primary reference	Structure-guided design of N-phenyl tertiary amines as transrepression-selective liver X receptor modulators with anti-inflammatory activity., Chao EY, Caravella JA, Watson MA, Campobasso N, Ghisletti S, Billin AN, Galardi C, Wang P, Laffitte BA, Iannone MA, Goodwin BJ, Nichols JA, Parks DJ, Stewart E, Wiethe RW, Williams SP, Smallwood A, Pearce KH, Glass CK, Willson TM, Zuercher WJ, Collins JL, J Med Chem. 2008 Sep 25;51(18):5758-65. PMID:18800767

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (147 Kb) [Save to disk] Biological Unit Coordinates (3fal.pdb1.gz) 141 Kb Biological Unit Coordinates (3fal.pdb2.gz) 72 Kb Biological Unit Coordinates (3fal.pdb3.gz) 72 Kb LPC: Ligand-Protein Contacts for 3FAL CSU: Contacts of Structural Units for 3FAL Likely Quarternary Molecular Structure file(s) for 3FAL Structure Factors (315 Kb) Retrieve 3FAL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3FAL from S2C, [Save to disk] Re-refined 3fal structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3FAL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3FAL

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3FAL, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3fal_A] [3fal_B] [3fal_D] [3fal] [3fal_C] SWISS-PROT database: [Q9Z0Y9] [P19793] Domain organization of [NR1H3_MOUSE] [RXRA_HUMAN] by SWISSPFAM Domain found in 3FAL: [HOLI ] by SMART

Other resources with information on 3FAL

Community annotation for 3FAL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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