3FG8 Structural Genomics, Unknown Function date Dec 05, 2008
title Crystal Structure Of Pas Domain Of Rha05790
authors C.Chang, X.Xu, H.Cui, A.Savchenko, A.Edwards, A.Joachimiak, Midwes For Structural Genomics (Mcsg)
compound source
Molecule: Uncharacterized Protein Rha05790
Chain: A, B, C, D, E, F
Engineered: Yes
Organism_scientific: Rhodococcus Sp. Rha1
Organism_taxid: 101510
Strain: Strain Rha1
Gene: Rha1_ro04714
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet Derivative
symmetry Space Group: C 1 2 1
R_factor 0.168 R_Free 0.223
crystal
cell
length a length b length c angle alpha angle beta angle gamma
149.695 55.889 101.856 90.00 132.61 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand 3PB, MSE enzyme
Gene RHA1
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk]
  • Biological Unit Coordinates (3fg8.pdb1.gz) 24 Kb
  • Biological Unit Coordinates (3fg8.pdb2.gz) 22 Kb
  • Biological Unit Coordinates (3fg8.pdb3.gz) 23 Kb
  • Biological Unit Coordinates (3fg8.pdb4.gz) 24 Kb
  • Biological Unit Coordinates (3fg8.pdb5.gz) 23 Kb
  • Biological Unit Coordinates (3fg8.pdb6.gz) 23 Kb
  • LPC: Ligand-Protein Contacts for 3FG8
  • CSU: Contacts of Structural Units for 3FG8
  • Likely Quarternary Molecular Structure file(s) for 3FG8
  • Structure Factors (785 Kb)
  • Retrieve 3FG8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3FG8 from S2C, [Save to disk]
  • Re-refined 3fg8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3FG8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3FG8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3FG8, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3fg8_E] [3fg8_B] [3fg8] [3fg8_A] [3fg8_C] [3fg8_D] [3fg8_F]
  • SWISS-PROT database: [Q0S7I6]
  • Domain organization of [Q0S7I6_RHOSR] by SWISSPFAM
  • Domain found in 3FG8: [PAS ] by SMART
  • Other resources with information on 3FG8
  • Community annotation for 3FG8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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