3GFO	Atp Binding Protein	date	Feb 27, 2009
title	Structure Of Cbio1 From Clostridium Perfringens: Part Of The Transporter Complex Cbionq.
authors	U.A.Ramagopal, C.Morano, R.Toro, M.Dickey, J.Do, S.K.Burley, S.C.A York Sgx Research Center For Structural Genomics (Nysgxrc)
compound		source
Molecule: Cobalt Import Atp-Binding Protein Cbio 1 Chain: A Ec: 3.6.3.- Engineered: Yes		Organism_scientific: Clostridium Perfringens Atcc 13124 Organism_taxid: 195103 Strain: Atcc 13124 Nctc 8237 Type A Gene: Cbio1, Cpf_0188 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Bc-Psgx4(Bc)
symmetry	Space Group: C 1 2 1	R_factor 0.206 R_Free 0.263
crystal cell	length a length b length c angle alpha angle beta angle gamma 113.701 57.578 41.245 90.00 103.39 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	SO4	enzyme	Hydrolase E.C.3.6.3 BRENDA
Gene	CPF
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk] Biological Unit Coordinates (3gfo.pdb1.gz) 40 Kb LPC: Ligand-Protein Contacts for 3GFO CSU: Contacts of Structural Units for 3GFO Likely Quarternary Molecular Structure file(s) for 3GFO Structure Factors (150 Kb) Retrieve 3GFO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GFO from S2C, [Save to disk] Re-refined 3gfo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GFO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3GFO

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3GFO, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gfo_A] [3gfo] SWISS-PROT database: [Q0TUN8] Domain organization of [CBIO1_CLOP1] by SWISSPFAM Domain found in 3GFO: [AAA ] by SMART

Other resources with information on 3GFO

Community annotation for 3GFO at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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