3GKM		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	FMT	enzyme
note	3GKM is a representative structure
Gene Ontology	Chain Function Process Component A peroxidase activity thioredoxin peroxidase activ... antioxidant activity
Primary reference	Insights into the Oxidoreduction Activity of Xanthomonas campestris Bacterioferritin Comigratory Protein from the Trapped Intermediate-Ligand Complex Structures., Liao SJ, Yang CY, Chin KH, Wang AH, Chou SH, J Mol Biol. 2009 May 25. PMID:19477183

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk] Biological Unit Coordinates (3gkm.pdb1.gz) 29 Kb LPC: Ligand-Protein Contacts for 3GKM CSU: Contacts of Structural Units for 3GKM Likely Quarternary Molecular Structure file(s) for 3GKM Structure Factors (294 Kb) Retrieve 3GKM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3GKM from S2C, [Save to disk] Re-refined 3gkm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3GKM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3gkm] [3gkm_A] SWISS-PROT database: [Q8P9V9]

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