3GZM Biosynthetic Protein date Apr 07, 2009
title Crystal Structure Of Holo Pfacp Reduced Monomer
authors J.R.Gallagher, S.T.Prigge
compound source
Molecule: Acyl Carrier Protein
Chain: A, B
Engineered: Yes
Organism_scientific: Plasmodium Falciparum
Organism_taxid: 5833
Strain: 3d7
Gene: Acp, Acpp
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Star
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmal-C2x
symmetry Space Group: P 41 21 2
R_factor 0.206 R_Free 0.276
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.177 54.177 101.629 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand BME, MLI, PNS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referencePlasmodium falciparum acyl carrier protein crystal structures in disulfide-linked and reduced states and their prevalence during blood stage growth., Gallagher JR, Prigge ST, Proteins. 2010 Feb 15;78(3):575-88. PMID:19768685
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (3gzm.pdb1.gz) 16 Kb
  • Biological Unit Coordinates (3gzm.pdb2.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 3GZM
  • CSU: Contacts of Structural Units for 3GZM
  • Likely Quarternary Molecular Structure file(s) for 3GZM
  • Structure Factors (311 Kb)
  • Retrieve 3GZM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3GZM from S2C, [Save to disk]
  • Re-refined 3gzm structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3GZM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3GZM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3GZM, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3gzm_B] [3gzm] [3gzm_A]
  • SWISS-PROT database: [O77077]
  • Domain organization of [O77077_PLAFA] by SWISSPFAM
  • Other resources with information on 3GZM
  • Community annotation for 3GZM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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