3H0H Transferase date Apr 09, 2009
title Human Fyn Sh3 Domain R96i Mutant, Crystal Form I
authors C.Dumas, M.P.Strub, S.T.Arold
compound source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Fyn
Chain: A
Fragment: Sh3 Domain, Unp Residues 73-142
Synonym: Fyn Tyrosine Kinase, P59-Fyn, Protooncogene Syn, S
Ec: 2.7.10.2
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fyn
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-2t
symmetry Space Group: P 41
R_factor 0.166 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.907 41.907 32.764 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.76 Å
ligand PG4 enzyme Transferase E.C.2.7.10.2 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk]
  • Biological Unit Coordinates (3h0h.pdb1.gz) 11 Kb
  • LPC: Ligand-Protein Contacts for 3H0H
  • CSU: Contacts of Structural Units for 3H0H
  • Structure Factors (81 Kb)
  • Retrieve 3H0H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3H0H from S2C, [Save to disk]
  • Re-refined 3h0h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3H0H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3H0H
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3H0H, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3h0h] [3h0h_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3H0H: [SH3 ] by SMART
  • Other resources with information on 3H0H
  • Community annotation for 3H0H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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