3HO7	Transcription	date	Jun 01, 2009
title	Crystal Structure Of Oxyr From Porphyromonas Gingivalis
authors	D.V.Svintradze, H.T.Wright, J.P.Lewis
compound		source
Molecule: Oxyr Chain: A, B Fragment: Regulatory Domain Synonym: Redox-Sensitive Transcriptional Activator Oxyr Engineered: Yes		Organism_scientific: Porphyromonas Gingivalis Organism_common: Bacteroides Gingivalis Organism_taxid: 837 Strain: Atcc 33277 Dsm 20709 Jcm 12257 Gene: Oxyr, Pg_0270 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1	R_factor 0.219 R_Free 0.245
crystal cell	length a length b length c angle alpha angle beta angle gamma 55.819 55.795 56.711 110.63 102.82 114.63
method	X-Ray Diffraction	resolution	1.58 Å
Gene	PG
Primary reference	Structures of the Porphyromonas gingivalis OxyR regulatory domain explain differences in expression of the OxyR regulon in Escherichia coli and P. gingivalis., Svintradze DV, Peterson DL, Collazo-Santiago EA, Lewis JP, Wright HT, Acta Crystallogr D Biol Crystallogr. 2013 Oct;69(Pt 10):2091-103. doi:, 10.1107/S0907444913019471. Epub 2013 Sep 20. PMID:24100327

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (165 Kb) [Save to disk] Biological Unit Coordinates (3ho7.pdb1.gz) 161 Kb CSU: Contacts of Structural Units for 3HO7 Structure Factors (766 Kb) Retrieve 3HO7 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3HO7 from S2C, [Save to disk] Re-refined 3ho7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3HO7, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ho7_A] [3ho7] [3ho7_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3HO7

Community annotation for 3HO7 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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