3HX9 Oxidoreductase date Jun 19, 2009
title Structure Of Heme-Degrader, Mhud (Rv3592), From Mycobacteriu Tuberculosis With Two Hemes Bound In Its Active Site
authors N.Chim, T.Q.Nguyen, A.Iniguez, C.W.Goulding
compound source
Molecule: Protein Rv3592
Chain: A, B
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Strain: H37rv
Gene: Mt3698, Rv3592, Tb11.2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet22b
symmetry Space Group: C 1 2 1
R_factor 0.186 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.971 64.622 71.082 90.00 90.01 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand CL, HEM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceUnusual Diheme conformation of the heme-degrading protein from Mycobacterium tuberculosis., Chim N, Iniguez A, Nguyen TQ, Goulding CW, J Mol Biol. 2010 Jan 22;395(3):595-608. Epub 2009 Nov 14. PMID:19917297
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (3hx9.pdb1.gz) 36 Kb
  • LPC: Ligand-Protein Contacts for 3HX9
  • CSU: Contacts of Structural Units for 3HX9
  • Structure Factors (292 Kb)
  • Retrieve 3HX9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3HX9 from S2C, [Save to disk]
  • Re-refined 3hx9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3HX9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3HX9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3HX9, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3hx9_B] [3hx9] [3hx9_A]
  • SWISS-PROT database: [O06156]
  • Domain organization of [O06156_MYCTU] by SWISSPFAM
  • Other resources with information on 3HX9
  • Community annotation for 3HX9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science