3I69 Transferase date Jul 06, 2009
title Apo Glutathione Transferase A1-1 Gimf-Helix Mutant
authors L.M.Balogh, I.Le Trong, R.E.Stenkamp, W.M.Atkins
compound source
Molecule: Glutathione S-Transferase A1
Chain: A, B, C, D, E, F, G, H
Synonym: Gth1, Ha Subunit 1, Gst-Epsilon, Gsta1-1, Gst Clas Member 1;
Ec: 2.5.1.18
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Gsta1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.225 R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.896 114.684 97.538 90.00 117.76 90.00
method X-Ray Diffractionresolution 2.38 Å
ligand GSH enzyme Transferase E.C.2.5.1.18 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G
  • peroxidase activity
  • glutathione peroxidase activ...


    • Primary referenceStructural analysis of a glutathione transferase A1-1 mutant tailored for high catalytic efficiency with toxic alkenals., Balogh LM, Le Trong I, Kripps KA, Tars K, Stenkamp RE, Mannervik B, Atkins WM, Biochemistry. 2009 Aug 18;48(32):7698-704. PMID:19618965
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (291 Kb) [Save to disk]
  • Biological Unit Coordinates (3i69.pdb1.gz) 75 Kb
  • Biological Unit Coordinates (3i69.pdb2.gz) 75 Kb
  • Biological Unit Coordinates (3i69.pdb3.gz) 73 Kb
  • Biological Unit Coordinates (3i69.pdb4.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 3I69
  • CSU: Contacts of Structural Units for 3I69
  • Structure Factors (1020 Kb)
  • Retrieve 3I69 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3I69 from S2C, [Save to disk]
  • Re-refined 3i69 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3I69 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3I69
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3I69, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3i69_F] [3i69_E] [3i69_D] [3i69_G] [3i69_A] [3i69_B] [3i69_H] [3i69] [3i69_C]
  • SWISS-PROT database: [P08263]
  • Domain organization of [GSTA1_HUMAN] by SWISSPFAM
    • Other resources with information on 3I69
  • Community annotation for 3I69 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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