3KCP Structural Protein date Oct 21, 2009
title Crystal Structure Of Interacting Clostridium Thermocellum Mu Components
authors J.J.Adams, M.A.Currie, E.A.Bayer, Z.Jia, S.P.Smith
compound source
Molecule: Cellulosomal-Scaffolding Protein A
Chain: A
Fragment: Cohesin 9 And Dockerin 1-2 Domains: Unp Residues
Synonym: Cellulosomal Glycoprotein S1sl, Cellulose-Integra Protein A, Cohesin;
Engineered: Yes
Organism_scientific: Clostridium Thermocellum Atcc 27405
Organism_taxid: 203119
Strain: Atcc 27405 Dsm 1237
Gene: Cipa, Cthe_3077
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Cellulosome Anchoring Protein, Cohesin Region
Chain: B
Fragment: Unp Residues 27-200
Engineered: Yes

Organism_scientific: Clostridium Thermocellum Atcc 27405
Organism_taxid: 203119
Strain: Atcc 27405 Dsm 1237
Gene: Cthe_1307, Sdba
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.206 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
169.977 58.019 56.150 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.94 Å
ligand CA, CL enzyme
Gene CTHE ; CTHE
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceInsights into Higher-Order Organization of the Cellulosome Revealed by a Dissect-and-Build Approach: Crystal Structure of Interacting Clostridium thermocellum Multimodular Components., Adams JJ, Currie MA, Ali S, Bayer EA, Jia Z, Smith SP, J Mol Biol. 2010 Jan 11. PMID:20070943
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (3kcp.pdb1.gz) 76 Kb
  • LPC: Ligand-Protein Contacts for 3KCP
  • CSU: Contacts of Structural Units for 3KCP
  • Structure Factors (573 Kb)
  • Retrieve 3KCP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KCP from S2C, [Save to disk]
  • Re-refined 3kcp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3KCP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3KCP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3KCP, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3kcp_B] [3kcp_A] [3kcp]
  • SWISS-PROT database: [A3DF10]
  • Domain organization of [A3DF10_CLOTH] by SWISSPFAM
  • Other resources with information on 3KCP
  • Community annotation for 3KCP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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