3KTT Chaperone date Nov 25, 2009
title Atomic Model Of Bovine Tric Cct2(Beta) Subunit Derived From Angstrom Cryo-Em Map
authors Y.Cong, M.L.Baker, S.J.Ludtke, J.Frydman, W.Chiu
compound source
Molecule: T-Complex Protein 1 Subunit Beta
Chain: B
Synonym: Tcp-1-Beta, Cct-Beta
 Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
symmetry Space Group
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.00 Å
Gene
Ontology
ChainFunctionProcessComponent
B


Primary reference4.0-A resolution cryo-EM structure of the mammalian chaperonin TRiC/CCT reveals its unique subunit arrangement., Cong Y, Baker ML, Jakana J, Woolford D, Miller EJ, Reissmann S, Kumar RN, Redding-Johanson AM, Batth TS, Mukhopadhyay A, Ludtke SJ, Frydman J, Chiu W, Proc Natl Acad Sci U S A. 2010 Mar 1. PMID:20194787
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (3ktt.pdb1.gz) 71 Kb
  • CSU: Contacts of Structural Units for 3KTT
  • Retrieve 3KTT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3KTT from S2C, [Save to disk]
    • View 3KTT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3KTT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3KTT, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ktt_B] [3ktt]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3KTT
  • Community annotation for 3KTT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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