3L9U Oxidoreductase date Jan 05, 2010
title Crystal Structure Of Salmonella Enterica Serovar Typhimurium
authors B.Heras, R.Jarrott, S.R.Shouldice, G.Guncar
compound source
Molecule: Disulfide Isomerase
Chain: A
Fragment: Unp Residues 25-223
Synonym: Thiol:Disulfide Interchange Protein Dsbl
Ec: 5.3.4.1
Engineered: Yes
Organism_scientific: Salmonella Enterica Subsp. Enterica Se Typhimurium;
Organism_taxid: 216597
Strain: Sl1344
Gene: Dsbl, Stm3193
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petlic
symmetry Space Group: P 21 21 2
R_factor 0.150 R_Free 0.184
crystal
cell
length a length b length c angle alpha angle beta angle gamma
85.582 46.593 60.222 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.57 Å
ligand
enzyme Isomerase E.C.5.3.4.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and functional characterization of three DsbA paralogues from Salmonella enterica serovar typhimurium., Heras B, Totsika M, Jarrott R, Shouldice SR, Guncar G, Achard ME, Wells TJ, Argente MP, McEwan AG, Schembri MA, J Biol Chem. 2010 Jun 11;285(24):18423-32. Epub 2010 Mar 16. PMID:20233716
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (74 Kb) [Save to disk]
  • Biological Unit Coordinates (3l9u.pdb1.gz) 70 Kb
  • CSU: Contacts of Structural Units for 3L9U
  • Structure Factors (236 Kb)
  • Retrieve 3L9U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3L9U from S2C, [Save to disk]
  • Re-refined 3l9u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3L9U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3L9U
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3L9U, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3l9u] [3l9u_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3L9U
  • Community annotation for 3L9U at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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