3LGK Lyase date Jan 20, 2010
title D99n Epi-Isozizaene Synthase
authors J.A.Aaron, X.Lin, D.E.Cane, D.W.Christianson
compound source
Molecule: Epi-Isozizaene Synthase
Chain: A
Synonym: Eizs, Sesquiterpene Synthase, Sesquiterpene Cyclas
Ec: 4.2.3.37
Engineered: Yes
Mutation: Yes
Organism_scientific: Streptomyces Coelicolor
Organism_taxid: 1902
Gene: Cyc1, Sco5222, Sc7e4.19
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21de3
symmetry Space Group: P 21 21 21
R_factor 0.162 R_Free 0.207
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.144 81.952 106.693 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.89 Å
ligand SO4 enzyme Lyase E.C.4.2.3.37 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of epi-isozizaene synthase from Streptomyces coelicolor A3(2), a platform for new terpenoid cyclization templates., Aaron JA, Lin X, Cane DE, Christianson DW, Biochemistry. 2010 Mar 2;49(8):1787-97. PMID:20131801
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (3lgk.pdb1.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 3LGK
  • CSU: Contacts of Structural Units for 3LGK
  • Structure Factors (361 Kb)
  • Retrieve 3LGK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3LGK from S2C, [Save to disk]
  • Re-refined 3lgk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3LGK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3LGK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3LGK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3lgk] [3lgk_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3LGK
  • Community annotation for 3LGK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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