3LJJ	Hydrolase Hydrolase Inhibitor	date	Jan 26, 2010
title	Bovine Trypsin In Complex With Ub-Thr 10
authors	C.Wegscheid-Gerlach, A.Heine, G.Klebe
compound		source
Molecule: Cationic Trypsin Chain: A Fragment: Residues 24-246 Synonym: Beta-Trypsin, Alpha-Trypsin Chain 1, Alpha-Trypsin Ec: 3.4.21.4 Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Bovine Organism_taxid: 9913 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 61.600 63.700 69.200 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.55 Å
ligand	10U, CA, SO4	enzyme	Hydrolase E.C.3.4.21.4 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Congeneric but Still Distinct: How Closely Related Trypsin Ligands Exhibit Different Thermodynamic and Structural Properties., Brandt T, Holzmann N, Muley L, Khayat M, Wegscheid-Gerlach C, Baum B, Heine A, Hangauer D, Klebe G, J Mol Biol. 2010 Nov 25. PMID:21111747

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk] Biological Unit Coordinates (3ljj.pdb1.gz) 38 Kb LPC: Ligand-Protein Contacts for 3LJJ CSU: Contacts of Structural Units for 3LJJ Structure Factors (300 Kb) Retrieve 3LJJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3LJJ from S2C, [Save to disk] Re-refined 3ljj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3LJJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3LJJ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3LJJ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ljj_A] [3ljj] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3LJJ: [Tryp_SPc ] by SMART

Other resources with information on 3LJJ

Community annotation for 3LJJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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