3LO6	Antimicrobial Protein	date	Feb 03, 2010
title	Crystal Structure Of Human Alpha-Defensin 1 (W26aba Mutant)
authors	M.Pazgier, W.Lu
compound		source
Molecule: Neutrophil Defensin 1 Chain: A, B Fragment: Unp Residues 65-94 Synonym: Hnp-1, Hp-1, Hp1, Defensin, Alpha 1, Hp 1-56, Neut Defensin 2, Hnp-2, Hp-2, Hp2; Engineered: Yes Mutation: Yes		Synthetic: Yes Other_details: Protein Naturally Occurs In Human
symmetry	Space Group: P 21 21 2	R_factor 0.169 R_Free 0.198
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.600 31.024 39.726 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.56 Å
ligand	ABA, CL, MPD	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Trp-26 imparts functional versatility to human {alpha}-defensin HNP1., Wei G, Pazgier M, de Leeuw E, Rajabi M, Li J, Zou G, Jung G, Yuan W, Lu WY, Lehrer RI, Lu W, J Biol Chem. 2010 Mar 10. PMID:20220136

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (17 Kb) [Save to disk] Biological Unit Coordinates (3lo6.pdb1.gz) 6 Kb Biological Unit Coordinates (3lo6.pdb2.gz) 6 Kb Biological Unit Coordinates (3lo6.pdb3.gz) 12 Kb LPC: Ligand-Protein Contacts for 3LO6 CSU: Contacts of Structural Units for 3LO6 Structure Factors (207 Kb) Retrieve 3LO6 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3LO6 from S2C, [Save to disk] Re-refined 3lo6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3LO6 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3LO6

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3LO6, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3lo6_B] [3lo6_A] [3lo6] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3LO6: [DEFSN ] by SMART

Other resources with information on 3LO6

Community annotation for 3LO6 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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