3LU9	Hydrolase	date	Feb 17, 2010
title	Crystal Structure Of Human Thrombin Mutant S195a In Complex Extracellular Fragment Of Human Par1
authors	P.S.Gandhi, Z.Chen, E.Di Cera
compound		source
Molecule: Prothrombin Chain: A, D Synonym: Coagulation Factor II, Activation Peptide Fragment Activation Peptide Fragment 2, Thrombin Light Chain, Thromb Chain; Ec: 3.4.21.5 Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: F2, Human Expression_system: Cricetulus Griseus Expression_system_taxid: 10029
Molecule: Prothrombin Chain: B, E Synonym: Coagulation Factor II, Activation Peptide Fragment Activation Peptide Fragment 2, Thrombin Light Chain, Thromb Chain; Ec: 3.4.21.5 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: F2 Expression_system: Cricetulus Griseus Expression_system_taxid: 10029
Molecule: Proteinase-Activated Receptor 1 Chain: C, F Synonym: Par-1, Thrombin Receptor, Coagulation Factor II Re Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: F2r, Cf2r, Par1, Tr Expression_system: Cricetulus Griseus Expression_system_taxid: 10029
symmetry	Space Group: P 1	R_factor 0.193 R_Free 0.236
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.334 50.171 85.502 76.39 83.93 73.74
method	X-Ray Diffraction	resolution	1.80 Å
ligand	GOL, NA, NAG	enzyme	Hydrolase E.C.3.4.21.5 BRENDA
note	3LU9 is a representative structure
Gene Ontology	Chain Function Process Component A, D E, B
Primary reference	Crystal structure of thrombin bound to the uncleaved extracellular fragment of PAR1., Gandhi PS, Chen Z, Di Cera E, J Biol Chem. 2010 May 14;285(20):15393-8. Epub 2010 Mar 17. PMID:20236938

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (235 Kb) [Save to disk] Biological Unit Coordinates (3lu9.pdb1.gz) 115 Kb Biological Unit Coordinates (3lu9.pdb2.gz) 115 Kb LPC: Ligand-Protein Contacts for 3LU9 CSU: Contacts of Structural Units for 3LU9 Structure Factors (954 Kb) Retrieve 3LU9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3LU9 from S2C, [Save to disk] Re-refined 3lu9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Visual 3D analysis of 3LU9

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Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3LU9, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3lu9_E] [3lu9] [3lu9_D] [3lu9_A] [3lu9_B] [3lu9_F] [3lu9_C] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3LU9: [Tryp_SPc ] by SMART

Other resources with information on 3LU9

Community annotation for 3LU9 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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