3M3M Transferase date Mar 09, 2010
title Crystal Structure Of Glutathione S-Transferase From Pseudomo Fluorescens [Pf-5]
authors A.Bagaria, S.K.Burley, S.Swaminathan, New York Sgx Research Cen Structural Genomics (Nysgxrc)
compound source
Molecule: Glutathione S-Transferase
Chain: A
Ec: 2.5.1.18
Engineered: Yes
Organism_scientific: Pseudomonas Fluorescens
Organism_taxid: 220664
Strain: Pf-5
Gene: Pfl_4361
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psgx3(Bc)
symmetry Space Group: P 41 21 2
R_factor 0.159 R_Free 0.196
crystal
cell
length a length b length c angle alpha angle beta angle gamma
101.746 101.746 48.880 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand EDO, GSH, MSE, NA enzyme Transferase E.C.2.5.1.18 BRENDA
Gene PFL
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (3m3m.pdb1.gz) 38 Kb
  • Biological Unit Coordinates (3m3m.pdb2.gz) 74 Kb
  • LPC: Ligand-Protein Contacts for 3M3M
  • CSU: Contacts of Structural Units for 3M3M
  • Structure Factors (383 Kb)
  • Retrieve 3M3M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3M3M from S2C, [Save to disk]
  • Re-refined 3m3m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3M3M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3M3M
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3M3M, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3m3m_A] [3m3m]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3M3M
  • Community annotation for 3M3M at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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