3MEB	Transferase	date	Mar 31, 2010
title	Structure Of Cytoplasmic Aspartate Aminotransferase From Gia Lamblia
authors	Seattle Structural Genomics Center For Infectious Disease (S
compound		source
Molecule: Aspartate Aminotransferase Chain: A, B Ec: 2.6.1.1 Engineered: Yes		Organism_scientific: Giardia Lamblia Organism_taxid: 184922 Strain: Atcc 50803 Gene: Gl50803_91056 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Ava0421
symmetry	Space Group: P 1 21 1	R_factor 0.174 R_Free 0.214
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.580 101.150 81.530 90.00 90.62 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand	EDO, PLP, SO4	enzyme	Transferase E.C.2.6.1.1 BRENDA
Gene	GL50803
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structures of aspartate aminotransferases from Trypanosoma brucei, Leishmania major and Giardia lamblia., Abendroth J, Choi R, Wall A, Clifton MC, Lukacs CM, Staker BL, Van Voorhis W, Myler P, Lorimer DD, Edwards TE, Acta Crystallogr F Struct Biol Commun. 2015 May;71(Pt 5):566-71. doi:, 10.1107/S2053230X15001831. Epub 2015 Apr 21. PMID:25945710

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (151 Kb) [Save to disk] Biological Unit Coordinates (3meb.pdb1.gz) 144 Kb LPC: Ligand-Protein Contacts for 3MEB CSU: Contacts of Structural Units for 3MEB Structure Factors (1091 Kb) Retrieve 3MEB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3MEB from S2C, [Save to disk] Re-refined 3meb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3MEB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3MEB

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3MEB, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3meb_B] [3meb] [3meb_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3MEB

Community annotation for 3MEB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---