3MII Hydrolase date Apr 10, 2010
title Crystal Structure Of Y0r391cphsp33 From Saccharomyces Cerev
authors P.C.Guo, Y.Y.Zhou, C.Z.Zhou, W.F.Li
compound source
Molecule: Probable Chaperone Protein Hsp33
Chain: A, B
Synonym: Possible Chaperone And Cysteine Protease Hsp33, He Protein 33;
Ec: 3.2.-.-
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: S288c
Gene: Yor091c
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28
symmetry Space Group: P 43 21 2
R_factor 0.222 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.420 96.420 132.230 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand CSO, GOL, PGE, SO4 enzyme Hydrolase E.C.3.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • glyoxalase III activity


  • Primary referenceStructure of Hsp33/YOR391Cp from the yeast Saccharomyces cerevisiae., Guo PC, Zhou YY, Ma XX, Li WF, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Dec 1;66(Pt, 12):1557-61. Epub 2010 Nov 16. PMID:21139195
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (3mii.pdb1.gz) 75 Kb
  • Biological Unit Coordinates (3mii.pdb2.gz) 38 Kb
  • Biological Unit Coordinates (3mii.pdb3.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 3MII
  • CSU: Contacts of Structural Units for 3MII
  • Structure Factors (717 Kb)
  • Retrieve 3MII in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MII from S2C, [Save to disk]
  • Re-refined 3mii structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3MII in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3MII
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3MII, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3mii_A] [3mii_B] [3mii]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3MII
  • Community annotation for 3MII at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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