3MNX Hydrolase date Apr 22, 2010
title Investigation Of Global And Local Effects Of Radiation Damag Porcine Pancreatic Elastase. Fourth Stage Of Radiation Dama
authors T.Petrova, S.Ginell, Y.Kim, G.Joachimiak, A.Joachimiak
compound source
Molecule: Chymotrypsin-Like Elastase Family Member 1
Chain: A
Synonym: Elastase-1
Ec: 3.4.21.36
Organism_scientific: Sus Scrofa
Organism_common: Pigs,Swine,Wild Boar
Organism_taxid: 9823
symmetry Space Group: P 21 21 21
R_factor 0.115 R_Free 0.158
crystal
cell
length a length b length c angle alpha angle beta angle gamma
50.248 57.831 74.747 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.39 Å
ligand NA, SO4 enzyme Hydrolase E.C.3.4.21.36 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray-induced deterioration of disulfide bridges at atomic resolution., Petrova T, Ginell S, Mitschler A, Kim Y, Lunin VY, Joachimiak G, Cousido-Siah A, Hazemann I, Podjarny A, Lazarski K, Joachimiak A, Acta Crystallogr D Biol Crystallogr. 2010 Oct;66(Pt 10):1075-91. Epub 2010, Sep 18. PMID:20944241
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk]
  • Biological Unit Coordinates (3mnx.pdb1.gz) 103 Kb
  • LPC: Ligand-Protein Contacts for 3MNX
  • CSU: Contacts of Structural Units for 3MNX
  • Structure Factors (612 Kb)
  • Retrieve 3MNX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3MNX from S2C, [Save to disk]
  • Re-refined 3mnx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3MNX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3MNX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3MNX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3mnx_A] [3mnx]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3MNX: [Tryp_SPc ] by SMART
  • Other resources with information on 3MNX
  • Community annotation for 3MNX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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