3N7H Transport Protein date May 27, 2010
title Crystal Structure Of Odorant Binding Protein 1 From Anophele (Agamobp1) With Deet (N,N-Diethyl-Meta-Toluamide) And Peg
authors K.E.Tsitsanou, S.E.Zographos
compound source
Molecule: Odorant Binding Protein
Chain: A, B
Fragment: Unp Residues 20-144
Engineered: Yes
Organism_scientific: Anopheles Gambiae
Organism_common: African Malaria Mosquito
Organism_taxid: 7165
Gene: Agamobp1, Obp-1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Origamib(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-22b(+)
symmetry Space Group: P 21 2 21
R_factor 0.172 R_Free 0.203
crystal
cell
length a length b length c angle alpha angle beta angle gamma
55.930 63.540 68.110 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.60 Å
ligand CL, DE3, MG, MOH, PEU enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceAnopheles gambiae odorant binding protein crystal complex with the synthetic repellent DEET: implications for structure-based design of novel mosquito repellents., Tsitsanou KE, Thireou T, Drakou CE, Koussis K, Keramioti MV, Leonidas DD, Eliopoulos E, Iatrou K, Zographos SE, Cell Mol Life Sci. 2011 Jun 14. PMID:21671117
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (108 Kb) [Save to disk]
  • Biological Unit Coordinates (3n7h.pdb1.gz) 100 Kb
  • LPC: Ligand-Protein Contacts for 3N7H
  • CSU: Contacts of Structural Units for 3N7H
  • Structure Factors (1689 Kb)
  • Retrieve 3N7H in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3N7H from S2C, [Save to disk]
  • Re-refined 3n7h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3N7H in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3N7H
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3N7H, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3n7h_A] [3n7h_B] [3n7h]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3N7H: [PhBP ] by SMART
  • Other resources with information on 3N7H
  • Community annotation for 3N7H at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science