3NBZ	Gtp-Binding Protein Transport Protein	date	Jun 04, 2010
title	Crystal Structure Of The Hiv-1 Rev Nes-Crm1-Rangtp Nuclear E Complex (Crystal I)
authors	T.Guttler, T.Madl, P.Neumann, D.Deichsel, L.Corsini, T.Monecke, R. M.Sattler, D.Gorlich
compound		source
Molecule: Exportin-1 Chain: A, D Synonym: Exp1, Chromosome Region Maintenance 1 Protein Homo Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Crm1, Xpo1, Xpo1 (Geneid: 103573) Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Blr Expression_system_vector_type: Plasmid
Molecule: Snurportin-1 Chain: B, E Synonym: Rna U Transporter 1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Snupn (Geneid: 10073), Rnut1, Snupn, Spn1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Blr Expression_system_vector_type: Plasmid
Molecule: Gtp-Binding Nuclear Protein Ran Chain: C, F Synonym: Gtpase Ran, Ras-Related Nuclear Protein, Ras-Like Tc4, Androgen Receptor-Associated Protein 24; Engineered: Yes Mutation: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ara24, Oksw-Cl.81, Ran, Ran (Geneid: 5901) Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Blr Expression_system_vector_type: Plasmid
symmetry	Space Group: P 1 21 1	R_factor 0.226 R_Free 0.285
crystal cell	length a length b length c angle alpha angle beta angle gamma 72.660 224.617 164.021 90.00 100.82 90.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	GTP, MG, NA	enzyme
Gene Ontology	Chain Function Process Component A, D E, B F, C
Primary reference	NES consensus redefined by structures of PKI-type and Rev-type nuclear export signals bound to CRM1., Guttler T, Madl T, Neumann P, Deichsel D, Corsini L, Monecke T, Ficner R, Sattler M, Gorlich D, Nat Struct Mol Biol. 2010 Oct 24. PMID:20972448

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1020 Kb) [Save to disk] Biological Unit Coordinates (3nbz.pdb1.gz) 507 Kb Biological Unit Coordinates (3nbz.pdb2.gz) 507 Kb LPC: Ligand-Protein Contacts for 3NBZ CSU: Contacts of Structural Units for 3NBZ Structure Factors (957 Kb) Retrieve 3NBZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3NBZ from S2C, [Save to disk] Re-refined 3nbz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3NBZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3NBZ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3NBZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3nbz_B] [3nbz_F] [3nbz_D] [3nbz_C] [3nbz_E] [3nbz_A] [3nbz] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 3NBZ: [CRM1_C] [IBN_N] [RAN ] by SMART

Other resources with information on 3NBZ

Community annotation for 3NBZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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