3NE2 Transport Protein date Jun 08, 2010
title Archaeoglobus Fulgidus Aquaporin
authors J.K.Lee, J.S.Finer-Moore, R.M.Stroud, Center For Structures Of Proteins (Csmp)
compound source
Molecule: Probable Aquaporin Aqpm
Chain: A, B, C, D, E, F, G, H
Engineered: Yes
 Organism_scientific: Archaeoglobus Fulgidus
Organism_taxid: 2234
Gene: Aqpm, Af_1426
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b
symmetry Space Group: P 1 21 1
R_factor 0.245 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.899 199.861 90.567 90.00 117.51 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand BOG enzyme
Gene AF
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (605 Kb) [Save to disk]
  • Biological Unit Coordinates (3ne2.pdb1.gz) 300 Kb
  • Biological Unit Coordinates (3ne2.pdb2.gz) 299 Kb
  • LPC: Ligand-Protein Contacts for 3NE2
  • CSU: Contacts of Structural Units for 3NE2
  • Structure Factors (521 Kb)
  • Retrieve 3NE2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NE2 from S2C, [Save to disk]
  • Re-refined 3ne2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3NE2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3NE2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3NE2, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1n3ne2, region E:1-181 [Jmol] [rasmolscript] [script source]
        - Domain d1r3ne2, region E:248-363 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ne2_B] [3ne2] [3ne2_A] [3ne2_C] [3ne2_G] [3ne2_E] [3ne2_F] [3ne2_D] [3ne2_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3NE2
  • Community annotation for 3NE2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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