3NRN Structural Genomics, Unknown Function date Jun 30, 2010
title Crystal Structure Of Pf1083 Protein From Pyrococcus Furiosus Northeast Structural Genomics Consortium Target Pfr223
authors J.Seetharaman, M.Su, P.Patel, R.Xiao, C.Ciccosanti, H.Wang, J.K.Ev R.Nair, T.B.Acton, B.Rost, G.T.Montelione, L.Tong, J.F.Hunt, Nort Structural Genomics Consortium (Nesg)
compound source
Molecule: Uncharacterized Protein Pf1083
Chain: A
Engineered: Yes
 Organism_scientific: Pyrococcus Furiosus
Organism_taxid: 186497
Strain: Dsm 3638
Gene: Pf1083
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)+ Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet 21-23c
symmetry Space Group: P 21 21 21
R_factor 0.223 R_Free 0.264
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.693 83.945 95.984 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand AMP, MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (3nrn.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 3NRN
  • CSU: Contacts of Structural Units for 3NRN
  • Structure Factors (407 Kb)
  • Retrieve 3NRN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3NRN from S2C, [Save to disk]
  • Re-refined 3nrn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3NRN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3NRN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3NRN, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3nrn] [3nrn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3NRN
  • Community annotation for 3NRN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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