3OTL Structural Genomics, Unknown Function date Sep 13, 2010
title Three-Dimensional Structure Of The Putative Uncharacterized From Rhizobium Leguminosarum At The Resolution 1.9a, Northe Structural Genomics Consortium Target Rlr261
authors A.Kuzin, S.Lew, J.Seetharaman, M.Mao, R.Xiao, C.Ciccosanti, D.Wang J.K.Everett, R.Nair, T.B.Acton, B.Rost, G.T.Montelione, L.Tong, J Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Putative Uncharacterized Protein
Chain: A, B
Engineered: Yes
Mutation: Yes
 Organism_scientific: Rhizobium Leguminosarum Bv. Viciae
Organism_taxid: 216596
Strain: 3841
Gene: Rl2761
symmetry Space Group: P 43 21 2
R_factor 0.166 R_Free 0.203
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.350 82.350 116.460 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand MES, MSE, PEG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (3otl.pdb1.gz) 106 Kb
  • LPC: Ligand-Protein Contacts for 3OTL
  • CSU: Contacts of Structural Units for 3OTL
  • Structure Factors (146 Kb)
  • Retrieve 3OTL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OTL from S2C, [Save to disk]
  • Re-refined 3otl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3OTL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3OTL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3OTL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3otl_B] [3otl] [3otl_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 3OTL
  • Community annotation for 3OTL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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