3OY1 Transherase Transferase Inhibitor date Sep 22, 2010
title Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3 Inhib In Vitro Cns-Like Pharmacokinetic Properties
authors G.D.Probst, S.Bowers, J.M.Sealy, A.Truong, J.Neitz, R.K.Hom, R.A.G Jr., A.W.Konradi, H.L.Sham, D.Quincy, H.Pan, N.Yao
compound source
Molecule: Mitogen-Activated Protein Kinase 10
Chain: A
Fragment: Unp Residues 40-401
Synonym: Map Kinase 10, Mapk 10, Stress-Activated Protein K Jnk3, C-Jun N-Terminal Kinase 3, Map Kinase P49 3f12;
Ec: 2.7.11.24
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Mapk10, Jnk3, Jnk3a, Prkm10
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.258 R_Free 0.299
crystal
cell
length a length b length c angle alpha angle beta angle gamma
52.126 71.328 107.752 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand 589 BindingDB enzyme Transferase E.C.2.7.11.24 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHighly selective c-Jun N-terminal kinase (JNK) 2 and 3 inhibitors with in vitro CNS-like pharmacokinetic properties prevent neurodegeneration., Probst GD, Bowers S, Sealy JM, Truong AP, Hom RK, Galemmo RA Jr, Konradi AW, Sham HL, Quincy DA, Pan H, Yao N, Lin M, Toth G, Artis DR, Zmolek W, Wong K, Qin A, Lorentzen C, Nakamura DF, Quinn KP, Sauer JM, Powell K, Ruslim L, Wright S, Chereau D, Ren Z, Anderson JP, Bard F, Yednock TA, Griswold-Prenner I, Bioorg Med Chem Lett. 2011 Jan 1;21(1):315-9. Epub 2010 Nov 5. PMID:21112785
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (63 Kb) [Save to disk]
  • Biological Unit Coordinates (3oy1.pdb1.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 3OY1
  • CSU: Contacts of Structural Units for 3OY1
  • Structure Factors (408 Kb)
  • Retrieve 3OY1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OY1 from S2C, [Save to disk]
  • Re-refined 3oy1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3OY1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3OY1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3OY1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3oy1] [3oy1_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3OY1: [S_TKc ] by SMART
  • Other resources with information on 3OY1
  • Community annotation for 3OY1 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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