3OZQ Hydrolase Inhibitor date Sep 27, 2010
title Crystal Structure Of Serpin48, Which Is A Highly Specific Se The Insect Tenebrio Molitor
authors S.H.Park, S.Piao, N.C.Ha
compound source
Molecule: Serpin48
Chain: A
Fragment: Unp Residues 23-389
Engineered: Yes
 Organism_scientific: Tenebrio Molitor
Organism_common: Yellow Mealworm
Organism_taxid: 7067
Gene: Spn48
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.221 R_Free 0.279
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.061 42.561 66.178 90.00 105.16 90.00
method X-Ray Diffractionresolution 1.90 Å
Gene
Ontology
ChainFunctionProcessComponent
A
  • serine-type endopeptidase in...


    • Primary referenceStructural and functional characterization of a highly specific serpin in the insect innate immunity., Park SH, Jiang R, Piao S, Zhang B, Kim EH, Kwon HM, Jin XL, Lee BL, Ha NC, J Biol Chem. 2011 Jan 14;286(2):1567-75. Epub 2010 Nov 3. PMID:21047786
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (3ozq.pdb1.gz) 60 Kb
  • CSU: Contacts of Structural Units for 3OZQ
  • Structure Factors (242 Kb)
  • Retrieve 3OZQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3OZQ from S2C, [Save to disk]
  • Re-refined 3ozq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3OZQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3OZQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3OZQ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3ozq] [3ozq_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3OZQ: [SERPIN ] by SMART
    • Other resources with information on 3OZQ
  • Community annotation for 3OZQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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  • Images from IMB Jena Image Library of Biological Macromolecules.

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