3P8X	Transcription Regulator	date	Oct 15, 2010
title	Synthesis, Structure, And Biological Activity Of Des-Side Ch Analogues Of 1alpha,25-Dihydroxyvitamin D3 With Substituent
authors	N.Rochel, Y.Sato, D.Moras
compound		source
Molecule: Vitamin D3 Receptor Chain: A Fragment: Ligand Binding Domain Synonym: Vdr, 1,25-Dihydroxyvitamin D3 Receptor, Nuclear Re Subfamily 1 Group I Member 1; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Vdr, Nr1i1 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28b
symmetry	Space Group: P 21 21 21	R_factor 0.189 R_Free 0.209
crystal cell	length a length b length c angle alpha angle beta angle gamma 44.628 51.342 130.820 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	SO4, ZYD	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Synthesis, structure, and biological activity of des-side chain analogues of 1alpha,25-dihydroxyvitamin D3 with substituents at C18., Verlinden L, Verstuyf A, Eelen G, Bouillon R, Ordonez-Moran P, Larriba MJ, Munoz A, Rochel N, Sato Y, Moras D, Maestro M, Seoane S, Dominguez F, Eduardo-Canosa S, Nicoletti D, Moman E, Mourino A, ChemMedChem. 2011 May 2;6(5):788-93. doi: 10.1002/cmdc.201100021. Epub, 2011 Mar 29. PMID:21520419

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (3p8x.pdb1.gz) 46 Kb LPC: Ligand-Protein Contacts for 3P8X CSU: Contacts of Structural Units for 3P8X Structure Factors (471 Kb) Retrieve 3P8X in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3P8X from S2C, [Save to disk] Re-refined 3p8x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3P8X in 3D

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Visual 3D analysis of 3P8X

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3P8X, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3p8x_A] [3p8x] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3P8X: [HOLI ] by SMART

Other resources with information on 3P8X

Community annotation for 3P8X at PDBWiki (http://pdbwiki.org)

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