3PLU	Peptide Binding Protein	date	Nov 15, 2010
title	Structure Of Hub-1 Protein In Complex With Snu66 Peptide (Hi
authors	S.K.Mishra, T.Ammon, G.M.Popowicz, M.Krajewski, R.J.Nagel, M.Ares T.A.Holak, S.Jentsch
compound		source
Molecule: Ubiquitin-Like Modifier Hub1 Chain: A, B Engineered: Yes Mutation: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast,Lager Beer Yeast,Yeast Organism_taxid: 4932 Gene: Hub1, Ynr032c-A Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21de3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-28
Molecule: 66 Kda U4u6.U5 Small Nuclear Ribonucleoprotein C Chain: C, D Fragment: Hindi Domain Engineered: Yes		Synthetic: Yes Organism_scientific: Saccharomyces Cerevisiae Organism_common: Brewer'S Yeast,Lager Beer Yeast,Yeast Organism_taxid: 4932
symmetry	Space Group: P 1	R_factor 0.185 R_Free 0.228
crystal cell	length a length b length c angle alpha angle beta angle gamma 35.230 36.340 36.780 83.44 89.85 85.84
method	X-Ray Diffraction	resolution	1.40 Å
note	3PLU is a representative structure
Gene Ontology	Chain Function Process Component A, B
Primary reference	Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing., Mishra SK, Ammon T, Popowicz GM, Krajewski M, Nagel RJ, Ares M, Holak TA, Jentsch S, Nature. 2011 May 25. PMID:21614000

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk] Biological Unit Coordinates (3plu.pdb1.gz) 17 Kb Biological Unit Coordinates (3plu.pdb2.gz) 18 Kb CSU: Contacts of Structural Units for 3PLU Structure Factors (214 Kb) Retrieve 3PLU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3PLU from S2C, [Save to disk] Re-refined 3plu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3PLU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3PLU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3PLU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3plu_B] [3plu_D] [3plu_A] [3plu_C] [3plu] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3PLU: [UBQ ] by SMART

Other resources with information on 3PLU

Community annotation for 3PLU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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