3Q1Q	Hydrolase Rna	date	Dec 17, 2010
title	Structure Of A Bacterial Ribonuclease P Holoenzyme In Comple Trna
authors	N.J.Reiter, A.Osterman, A.Torres-Larios, K.K.Swinger, T.Pan, A.Mo
compound		source
Molecule: Rnase P Rna Chain: B Engineered: Yes		Synthetic: Yes Other_details: The Rna Was Prepared By In Vitro Transcripti
Molecule: Ribonuclease P Protein Component Chain: A Synonym: Rnase P Protein, Rnasep Protein, Protein C5 Ec: 3.1.26.5 Engineered: Yes		Organism_scientific: Thermotoga Maritima Organism_taxid: 2336 Gene: Rnpa, Rnpa Or Tm1463, Rnpb, Tm_1463 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21 (De3) Plyss Expression_system_plasmid: Pgex4t-2
Molecule: Trna (Phe) Chain: C Engineered: Yes		Synthetic: Yes Other_details: The Rna Was Prepared By In Vitro Transcripti
symmetry	Space Group: P 31 2 1	R_factor 0.250 R_Free 0.272
crystal cell	length a length b length c angle alpha angle beta angle gamma 169.290 169.290 184.990 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.80 Å
ligand	MG, PO4	enzyme	Hydrolase E.C.3.1.26.5 BRENDA
note	3Q1Q supersedes 3OK7
Gene	TM
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA., Reiter NJ, Osterman A, Torres-Larios A, Swinger KK, Pan T, Mondragon A, Nature. 2010 Nov 14. PMID:21076397

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (174 Kb) [Save to disk] Biological Unit Coordinates (3q1q.pdb1.gz) 169 Kb LPC: Ligand-Protein Contacts for 3Q1Q CSU: Contacts of Structural Units for 3Q1Q Structure Factors (308 Kb) Retrieve 3Q1Q in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3Q1Q from S2C, [Save to disk] Re-refined 3q1q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3Q1Q in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3Q1Q

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3Q1Q, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3q1q] [3q1q_B] [3q1q_C] [3q1q_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3Q1Q

Community annotation for 3Q1Q at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---