3Q32 Transferase Transferase Inhibitor date Dec 21, 2010
title Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor
authors J.S.Sack
compound source
Molecule: Tyrosine-Protein Kinase Jak2
Chain: A, B
Fragment: Protein Kinase 2 Domain (Unp Residues 839-1132)
Synonym: Janus Kinase 2, Jak-2
Ec: 2.7.10.2
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Jak2
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 41
R_factor 0.178 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
110.590 110.590 69.960 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand J2I, PTR BindingDB enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referencePyrrolo[1,2-f]triazines as JAK2 inhibitors: Achieving potency and selectivity for JAK2 over JAK3., Harikrishnan LS, Kamau MG, Wan H, Inghrim JA, Zimmermann K, Sang X, Mastalerz HA, Johnson WL, Zhang G, Lombardo LJ, Poss MA, Trainor GL, Tokarski JS, Lorenzi MV, You D, Gottardis MM, Baldwin KF, Lippy J, Nirschl DS, Qiu R, Miller AV, Khan J, Sack JS, Purandare AV, Bioorg Med Chem Lett. 2011 Jan 11. PMID:21282055
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk]
  • Biological Unit Coordinates (3q32.pdb1.gz) 53 Kb
  • Biological Unit Coordinates (3q32.pdb2.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 3Q32
  • CSU: Contacts of Structural Units for 3Q32
  • Structure Factors (394 Kb)
  • Retrieve 3Q32 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3Q32 from S2C, [Save to disk]
  • Re-refined 3q32 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3Q32 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3Q32
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3Q32, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3q32_B] [3q32_A] [3q32]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3Q32: [TyrKc ] by SMART
  • Other resources with information on 3Q32
  • Community annotation for 3Q32 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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