3Q95 Transcription Regulator date Jan 07, 2011
title Crystal Structure Of Human Estrogen Receptor Alpha Lbd In Co Grip Peptide And Estriol
authors S.S.Rajan, Y.Kim, K.Vanek, A.Joachimiak, G.L.Greene
compound source
Molecule: Estrogen Receptor
Chain: A
Fragment: Ligand Binding Domain Residues 298-554
Synonym: Er, Er-Alpha, Estradiol Receptor, Nuclear Receptor Group A Member 1;
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Er Alpha, Esr, Esr1, Nr3a1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7

Molecule: Estrogen Receptor
Chain: B
Fragment: Lxxll Motif 2 Residues 686-698
Synonym: Er, Er-Alpha, Estradiol Receptor, Nuclear Receptor Group A Member 1;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Er Alpha, Esr, Esr1, Nr3a1
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7

Molecule: Nuclear Receptor Coactivator 2
Chain: C, D
Synonym: Ncoa-2, Class E Basic Helix-Loop-Helix Protein 75, Transcriptional Intermediary Factor 2, Htif2;
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Synthetic Peptide
symmetry Space Group: P 1 21 1
R_factor 0.196 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.528 81.865 58.886 90.00 111.13 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand CL, CME, ESL enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk]
  • Biological Unit Coordinates (3q95.pdb1.gz) 86 Kb
  • Biological Unit Coordinates (3q95.pdb2.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 3Q95
  • CSU: Contacts of Structural Units for 3Q95
  • Structure Factors (238 Kb)
  • Retrieve 3Q95 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3Q95 from S2C, [Save to disk]
  • Re-refined 3q95 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3Q95 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3Q95
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3Q95, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3q95_D] [3q95_C] [3q95] [3q95_A] [3q95_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3Q95: [HOLI ] by SMART
  • Other resources with information on 3Q95
  • Community annotation for 3Q95 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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