3RJ7 Lyase Lyase Inhibitor date Apr 15, 2011
title Human Carbonic Anhydrase II Complexed With Its Inhibitor Rhe Triscarbonyl-Cyclopentadienyl-Carboxy-4-Aminomethylbenzene- Sulfonamide
authors B.Spingler, D.Can, R.Alberto
compound source
Molecule: Carbonic Anhydrase 2
Chain: A
Synonym: Carbonate Dehydratase II, Carbonic Anhydrase C, Ca Carbonic Anhydrase II, Ca-II;
Ec: 4.2.1.1
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 1 21 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.243 41.639 72.107 90.00 104.55 90.00
method X-Ray Diffractionresolution 1.20 Å
ligand DMS, MBO, RCS, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference[(Cp-R)M(CO)(3) ] (M=Re or (99m) Tc) Arylsulfonamide, Arylsulfamide, and Arylsulfamate Conjugates for Selective Targeting of Human Carbonic Anhydrase IX., Can D, Spingler B, Schmutz P, Mendes F, Raposinho P, Fernandes C, Carta F, Innocenti A, Santos I, Supuran CT, Alberto R, Angew Chem Int Ed Engl. 2012 Feb 17. doi: 10.1002/anie.201107333. PMID:22344779
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (3rj7.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 3RJ7
  • CSU: Contacts of Structural Units for 3RJ7
  • Structure Factors (2790 Kb)
  • Retrieve 3RJ7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3RJ7 from S2C, [Save to disk]
  • Re-refined 3rj7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 3RJ7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 3RJ7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3RJ7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3rj7] [3rj7_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3RJ7: [Carb_anhydrase ] by SMART
    • Other resources with information on 3RJ7
  • Community annotation for 3RJ7 at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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