3RTC	Lyase	date	May 03, 2011
title	Crystal Structure Of Tm0922, A Fusion Of A Domain Of Unknown And Adpatp-Dependent Nad(P)H-Hydrate Dehydratase From Ther Maritima Soaked With Nad And Atp.
authors	I.A.Shumilin, M.Cymborowski, S.A.Lesley, W.Minor
compound		source
Molecule: Putative Uncharacterized Protein Chain: A Ec: 4.2.1.93 Engineered: Yes		Organism_scientific: Thermotoga Maritima Organism_taxid: 243274 Strain: Msb8 Gene: Tm0922, Tm_0922 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pmh1
Molecule: Unknown Peptide, Probably From Expression Host Chain: B		Organism_scientific: Escherichia Coli Organism_taxid: 469008 Strain: Bl21(De3) Other_details: Unknown Peptide, Probably From Expression Ho
symmetry	Space Group: I 4 2 2	R_factor 0.169 R_Free 0.209
crystal cell	length a length b length c angle alpha angle beta angle gamma 122.399 122.399 155.122 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	ATP, K, MG, NAD	enzyme	Lyase E.C.4.2.1.93 BRENDA
Gene	TM
Gene Ontology	Chain Function Process Component A
Primary reference	Identification of Unknown Protein Function Using Metabolite Cocktail Screening., Shumilin IA, Cymborowski M, Chertihin O, Jha KN, Herr JC, Lesley SA, Joachimiak A, Minor W, Structure. 2012 Aug 28. PMID:22940582

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (164 Kb) [Save to disk] Biological Unit Coordinates (3rtc.pdb1.gz) 1235 Kb LPC: Ligand-Protein Contacts for 3RTC CSU: Contacts of Structural Units for 3RTC Structure Factors (526 Kb) Retrieve 3RTC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3RTC from S2C, [Save to disk] Re-refined 3rtc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3RTC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3RTC

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3RTC, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3rtc_A] [3rtc_B] [3rtc] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3RTC

Community annotation for 3RTC at PDBWiki (http://pdbwiki.org)

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