3RWP	Transferase Transferase Inhibitor	date	May 09, 2011
title	Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1)
authors	S.E.Greasley, M.Hickey, R.A.Ferre, M.Krauss, C.Cronin
compound		source
Molecule: 3-Phosphoinositide-Dependent Protein Kinase 1 Chain: A Fragment: Kinase Domain, Residues 51-359 Synonym: Hpdk1 Ec: 2.7.11.1 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Pdpk1, Pdk1 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108
symmetry	Space Group: P 32 2 1	R_factor 0.172 R_Free 0.213
crystal cell	length a length b length c angle alpha angle beta angle gamma 122.982 122.982 47.505 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.92 Å
ligand	ABQ, GOL, SEP, SO4 BindingDB	enzyme	Transferase E.C.2.7.11.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery of Novel, Potent and Selective Inhibitors of 3-Phosphoinositide-Dependent Kinase (PDK1)., Murphy ST, Bailey S, Burke BJ, Chappie TA, Ferre R, Greasley S, Hickey MJ, Humphrey J, Kablaoui N, Kath J, Kazmirski S, Kraus M, Kupchinskey S, Li J, Marx MA, Richter D, Tanis SP, Tran K, Vernier W, Alton G, Baxi SM, Ermolieff J, Lingardo L, Xie Z, Yin MJ, Yu XH, J Med Chem. 2011 Oct 31. PMID:22040023

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (3rwp.pdb1.gz) 53 Kb Biological Unit Coordinates (3rwp.pdb2.gz) 104 Kb LPC: Ligand-Protein Contacts for 3RWP CSU: Contacts of Structural Units for 3RWP Structure Factors (427 Kb) Retrieve 3RWP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3RWP from S2C, [Save to disk] Re-refined 3rwp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3RWP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3RWP

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3RWP, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3rwp_A] [3rwp] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3RWP: [S_TKc ] by SMART

Other resources with information on 3RWP

Community annotation for 3RWP at PDBWiki (http://pdbwiki.org)

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