3SJA Hydrolase Transport Protein date Jun 21, 2011
title Crystal Structure Of S. Cerevisiae Get3 In The Open State In With Get1 Cytosolic Domain
authors S.Reitz, K.Wild, I.Sinning
compound source
Molecule: Atpase Get3
Chain: A, B, E, F, I
Ec: 3.6.-.-
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
Gene: Get3, Arr4, Ydl100c, D2371
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet24d

Molecule: Golgi To Er Traffic Protein 1
Chain: C, D, G, H, J
Fragment: Get1 Cytosolic Domain From Residue 36 To 93
Engineered: Yes

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
Gene: Get1, Mdm39, Ygl020c
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet24d
symmetry Space Group: P 21 21 2
R_factor 0.181 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
204.120 91.460 149.180 90.00 90.00 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand PO4, ZN enzyme Hydrolase E.C.3.6 BRENDA
note 3SJA is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, I


J, H, C, D, G


Primary referenceStructural Basis for Tail-Anchored Membrane Protein Biogenesis by the Get3-Receptor Complex., Stefer S, Reitz S, Wang F, Wild K, Pang YY, Schwarz D, Bomke J, Hein C, Lohr F, Bernhard F, Denic V, Dotsch V, Sinning I, Science. 2011 Jun 30. PMID:21719644
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (670 Kb) [Save to disk]
  • Biological Unit Coordinates (3sja.pdb1.gz) 266 Kb
  • Biological Unit Coordinates (3sja.pdb2.gz) 268 Kb
  • Biological Unit Coordinates (3sja.pdb3.gz) 268 Kb
  • LPC: Ligand-Protein Contacts for 3SJA
  • CSU: Contacts of Structural Units for 3SJA
  • Structure Factors (450 Kb)
  • Retrieve 3SJA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3SJA from S2C, [Save to disk]
  • Re-refined 3sja structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3SJA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3SJA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3SJA, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3sja_J] [3sja_I] [3sja] [3sja_D] [3sja_C] [3sja_F] [3sja_G] [3sja_H] [3sja_E] [3sja_B] [3sja_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3SJA
  • Community annotation for 3SJA at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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