3TDC	Ligase Ligase Inhibitor	date	Aug 10, 2011
title	Crystal Structure Of Human Acetyl-Coa Carboxylase 2
authors	D.R.Dougan, C.D.Mol
compound		source
Molecule: Acetyl-Coa Carboxylase 2 Variant Chain: A Fragment: Unp Residues 921-1676 Ec: 6.4.1.2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_vector_type: Baculovirus
symmetry	Space Group: C 2 2 21	R_factor 0.169 R_Free 0.218
crystal cell	length a length b length c angle alpha angle beta angle gamma 113.921 119.756 146.035 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.41 Å
ligand	0EU BindingDB	enzyme	Ligase E.C.6.4.1.2 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Design, synthesis, and structure-activity relationships of spirolactones bearing 2-ureidobenzothiophene as acetyl-CoA carboxylases inhibitors., Yamashita T, Kamata M, Endo S, Yamamoto M, Kakegawa K, Watanabe H, Miwa K, Yamano T, Funata M, Sakamoto J, Tani A, Mol CD, Zou H, Dougan DR, Sang B, Snell G, Fukatsu K, Bioorg Med Chem Lett. 2011 Nov 1;21(21):6314-8. Epub 2011 Sep 6. PMID:21944854

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk] Biological Unit Coordinates (3tdc.pdb1.gz) 126 Kb Biological Unit Coordinates (3tdc.pdb2.gz) 248 Kb LPC: Ligand-Protein Contacts for 3TDC CSU: Contacts of Structural Units for 3TDC Structure Factors (588 Kb) Retrieve 3TDC in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3TDC from S2C, [Save to disk] Re-refined 3tdc structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3TDC in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3TDC

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3TDC, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3tdc_A] [3tdc] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3TDC

Community annotation for 3TDC at PDBWiki (http://pdbwiki.org)

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