3UC5 Transferase date Oct 26, 2011
title Phosphopantetheine Adenylyltransferase From Mycobacterium Tu Complexed With Atp
authors V.I.Timofeev, E.A.Smirnova, L.A.Chupova, R.S.Esipov, I.P.Kuranov
compound source
Molecule: Phosphopantetheine Adenylyltransferase
Chain: A
Synonym: Dephospho-Coa Pyrophosphorylase, Pantetheine-Phosp Adenylyltransferase, Ppat;
Ec: 2.7.7.3
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 1773
Gene: Coad, Kdtb, Rv2965c, Mt3043, Mtcy349.22, U0002e
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Er2566per-Ppat
symmetry Space Group: H 3 2
R_factor 0.177 R_Free 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
99.909 99.909 114.419 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.70 Å
ligand ATP enzyme Transferase E.C.2.7.7.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray study of the conformational changes in the molecule of phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis during the catalyzed reaction., Timofeev V, Smirnova E, Chupova L, Esipov R, Kuranova I, Acta Crystallogr D Biol Crystallogr. 2012 Dec;68(Pt 12):1660-70. doi:, 10.1107/S0907444912040206. Epub 2012 Nov 9. PMID:23151631
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (3uc5.pdb1.gz) 324 Kb
  • LPC: Ligand-Protein Contacts for 3UC5
  • CSU: Contacts of Structural Units for 3UC5
  • Structure Factors (207 Kb)
  • Retrieve 3UC5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UC5 from S2C, [Save to disk]
  • Re-refined 3uc5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UC5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UC5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UC5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3uc5] [3uc5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3UC5
  • Community annotation for 3UC5 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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