3UES	Hydrolase Hydrolase Inhibitor	date	Oct 31, 2011
title	Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacte Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin
authors	H.Sakurama, S.Fushinobu, E.Yoshida, Y.Honda, M.Hidaka, H.Ashida, M T.Katayama, K.Yamamoto, H.Kumagai
compound		source
Molecule: Alpha-1,34-Fucosidase Chain: A, B Ec: 3.2.1.111 Engineered: Yes		Organism_scientific: Bifidobacterium Longum Subsp. Infantis Organism_taxid: 391904 Strain: Atcc15697 Gene: Blij_2413, Blon_2336 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(Delta)Lacz (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-30b
symmetry	Space Group: P 21 21 21	R_factor 0.160 R_Free 0.191
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.981 120.597 142.469 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.60 Å
ligand	DFU, EDO, NA	enzyme	Hydrolase E.C.3.2.1.111 BRENDA
Gene	BLIJ ; BLON
Gene Ontology	Chain Function Process Component A, B
Primary reference	1,3-1,4-alpha-L-fucosynthase that specifically introduces Lewis a/x antigens into type-1/2 chains., Sakurama H, Fushinobu S, Hidaka M, Yoshida E, Honda Y, Ashida H, Kitaoka M, Kumagai H, Yamamoto K, Katayama T, J Biol Chem. 2012 May 11;287(20):16709-19. Epub 2012 Mar 26. PMID:22451675

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (168 Kb) [Save to disk] Biological Unit Coordinates (3ues.pdb1.gz) 162 Kb LPC: Ligand-Protein Contacts for 3UES CSU: Contacts of Structural Units for 3UES Structure Factors (2108 Kb) Retrieve 3UES in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3UES from S2C, [Save to disk] Re-refined 3ues structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3UES in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3UES

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3UES, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ues] [3ues_A] [3ues_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3UES: [Alpha_L_fucos ] by SMART

Other resources with information on 3UES

Community annotation for 3UES at PDBWiki (http://pdbwiki.org)

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