3UJ3 Recombination date Nov 07, 2011
title Crystal Structure Of The Synaptic Tetramer Of The G-Segment (Gin)
authors C.J.Ritacco, J.Wang, S.Kamtekar, T.A.Steitz
compound source
Molecule: Dna-Invertase
Chain: X
Engineered: Yes
Mutation: Yes
Organism_scientific: Enterobacteria Phage Mu
Organism_taxid: 10677
Gene: Gin, 51
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 62 2 2
R_factor 0.257 R_Free 0.289
crystal
cell
length a length b length c angle alpha angle beta angle gamma
116.840 116.840 117.640 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.51 Å
note 3UJ3 supersedes 3PLO
Gene
Ontology
ChainFunctionProcessComponent
X


Primary referenceCrystal structure of an intermediate of rotating dimers within the synaptic tetramer of the G-segment invertase., Ritacco CJ, Kamtekar S, Wang J, Steitz TA, Nucleic Acids Res. 2013 Feb 1;41(4):2673-82. doi: 10.1093/nar/gks1303. Epub 2012 , Dec 28. PMID:23275567
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (3uj3.pdb1.gz) 171 Kb
  • CSU: Contacts of Structural Units for 3UJ3
  • Structure Factors (99 Kb)
  • Retrieve 3UJ3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3UJ3 from S2C, [Save to disk]
  • Re-refined 3uj3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3UJ3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3UJ3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3UJ3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3uj3_X] [3uj3]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 3UJ3: [Resolvase ] by SMART
  • Other resources with information on 3UJ3
  • Community annotation for 3UJ3 at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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