3USN Hydrolase date Jun 18, 1998
title Structure Of The Catalytic Domain Of Human Fibroblast Strome Inhibited With The Thiadiazole Inhibitor Ipnu-107859, Nmr, Structure
authors B.J.Stockman
compound source
Molecule: Stromelysin-1
Chain: A
Fragment: Catalytic Domain, Residues 83(1) - 250(168)
Synonym: Matrix Metalloproteinase-3, Proteoglycanase
Ec: 3.4.24.17
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Bl21
Cell: Fibroblast
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3) Plysee (Pstro255)
Expression_system_plasmid: Bl21
methodSolution NMR
ligand ATT, CA, ZN BindingDB enzyme Hydrolase E.C.3.4.24.17 BRENDA
related structures by homologous chain: 3AYK, 4AYK
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structures of stromelysin complexed to thiadiazole inhibitors., Stockman BJ, Waldon DJ, Gates JA, Scahill TA, Kloosterman DA, Mizsak SA, Jacobsen EJ, Belonga KL, Mitchell MA, Mao B, Petke JD, Goodman L, Powers EA, Ledbetter SR, Kaytes PS, Vogeli G, Marshall VP, Petzold GL, Poorman RA, Protein Sci 1998 Nov;7(11):2281-6. PMID:9827994
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (3usn.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 3USN
  • CSU: Contacts of Structural Units for 3USN
  • Original NMR restraints for 3USN from PDB
  • Retrieve 3USN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3USN from S2C, [Save to disk]
  • View 3USN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3USN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3USN, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d3usn__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3usn_A] [3usn]
  • SWISS-PROT database: [P08254]
  • Domain organization of [MMP3_HUMAN] by SWISSPFAM
  • Domain found in 3USN: [ZnMc ] by SMART
  • Other resources with information on 3USN
  • Community annotation for 3USN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 3USN from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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