3UWO	Transferase Transferase Inhibitor	date	Dec 02, 2011
title	Structure Guided Development Of Novel Thymidine Mimetics Tar Pseudomonas Aeruginosa Thymidylate Kinase: From Hit To Lead Generation
authors	J.Y.Choi, M.S.Plummer, J.Starr, C.R.Desbonnet, H.H.Soutter, J.Cha J.R.Miller, K.Dillman, A.A.Miller, W.R.Roush
compound		source
Molecule: Thymidylate Kinase Chain: A, B Fragment: Kinase Domain Synonym: Dtmp Kinase Ec: 2.7.4.9 Engineered: Yes		Organism_scientific: Pseudomonas Aeruginosa Organism_taxid: 208964 Strain: Atcc 15692 Pao1 1c Prs 101 Lmg 12228 Gene: Pa2962, Tmk Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21 De3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: P 1 21 1	R_factor 0.192 R_Free 0.212
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.265 56.012 82.068 90.00 95.30 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	0DJ	enzyme	Transferase E.C.2.7.4.9 BRENDA
Gene Ontology	Chain Function Process Component A, B thymidylate kinase activity uridylate kinase activity
Primary reference	Structure Guided Development of Novel Thymidine Mimetics Targeting Pseudomonas aeruginosa Thymidylate Kinase: From Hit to Lead Generation., Choi JY, Plummer MS, Starr J, Desbonnet CR, Soutter H, Chang J, Miller JR, Dillman K, Miller AA, Roush WR, J Med Chem. 2012 Jan 26;55(2):852-70. Epub 2012 Jan 13. PMID:22243413

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk] Biological Unit Coordinates (3uwo.pdb1.gz) 33 Kb Biological Unit Coordinates (3uwo.pdb2.gz) 33 Kb Biological Unit Coordinates (3uwo.pdb3.gz) 64 Kb LPC: Ligand-Protein Contacts for 3UWO CSU: Contacts of Structural Units for 3UWO Structure Factors (305 Kb) Retrieve 3UWO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3UWO from S2C, [Save to disk] Re-refined 3uwo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3UWO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3UWO

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3UWO, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3uwo_A] [3uwo_B] [3uwo] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3UWO

Community annotation for 3UWO at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---