3V3C Photosynthesis date Dec 13, 2011
title Crystal Structure Of Chloroplast Atp Synthase C-Ring From Pi Sativum
authors S.Saroussi, N.Nelson
compound source
Molecule: Atp Synthase Subunit C, Chloroplastic
Chain: A, B, C, D, E, F, G, H, I, J, K, L, M, N
Synonym: Atp Synthase F(0) Sector Subunit C, Atpase Subunit Type Atpase Subunit C, F-Atpase Subunit C, Lipid-Binding Pr
Organism_scientific: Pisum Sativum
Organism_common: Garden Pea,Peas
Organism_taxid: 3888
Other_details: Chloroplast
symmetry Space Group: C 1 2 1
R_factor 0.300 R_Free 0.322
crystal
cell
length a length b length c angle alpha angle beta angle gamma
139.130 102.380 122.430 90.00 101.22 90.00
method X-Ray Diffractionresolution 3.40 Å
ligand DGD, NA, YT3 enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, N, K, E, B, H, M, C, D, I, G, L


Primary referenceStructure and flexibility of the C-ring in the electromotor of rotary F(o)F(1)-ATPase of pea chloroplasts., Saroussi S, Schushan M, Ben-Tal N, Junge W, Nelson N, PLoS One. 2012;7(9):e43045. doi: 10.1371/journal.pone.0043045. Epub 2012 Sep 25. PMID:23049735
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (322 Kb) [Save to disk]
  • Biological Unit Coordinates (3v3c.pdb1.gz) 312 Kb
  • LPC: Ligand-Protein Contacts for 3V3C
  • CSU: Contacts of Structural Units for 3V3C
  • Structure Factors (169 Kb)
  • Retrieve 3V3C in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3V3C from S2C, [Save to disk]
  • Re-refined 3v3c structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3V3C in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 3V3C
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 3V3C, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3v3c_I] [3v3c_F] [3v3c_M] [3v3c_C] [3v3c_N] [3v3c_K] [3v3c_B] [3v3c_E] [3v3c] [3v3c_D] [3v3c_G] [3v3c_J] [3v3c_H] [3v3c_A] [3v3c_L]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 3V3C
  • Community annotation for 3V3C at PDBWiki (http://pdbwiki.org)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science