OCA Atlas for 3V3L

3V3L

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

MSE, V3L

enzyme

note

3V3L is a representative structure

Gene
Ontology

Chain	Function	Process	Component
B, A

Primary reference

Recognition of the iso-ADP-ribose moiety in poly(ADP-ribose) by WWE domains suggests a general mechanism for poly(ADP-ribosyl)ation-dependent ubiquitination., Wang Z, Michaud GA, Cheng Z, Zhang Y, Hinds TR, Fan E, Cong F, Xu W, Genes Dev. 2012 Feb 1;26(3):235-40. Epub 2012 Jan 19. PMID:22267412

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (78 Kb) [Save to disk]

Biological Unit Coordinates (3v3l.pdb1.gz) 36 Kb

Biological Unit Coordinates (3v3l.pdb2.gz) 37 Kb

LPC: Ligand-Protein Contacts for 3V3L

CSU: Contacts of Structural Units for 3V3L

Structure Factors (1295 Kb)

Retrieve 3V3L in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 3V3L from S2C, [Save to disk]

Re-refined 3v3l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3V3L in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3v3l] [3v3l_A] [3v3l_B]

SWISS-PROT database:

Domain found in 3V3L: [WWE ] by SMART

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]