3V97 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GLC, GOL, SAH, TRV enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A
  • rRNA (guanine-N2-)-methyltra...
  • rRNA (guanine-N7-)-methyltra...


  • Primary referenceStructure of the bifunctional methyltransferase YcbY (RlmKL) that adds the m7G2069 and m2G2445 modifications in Escherichia coli 23S rRNA., Wang KT, Desmolaize B, Nan J, Zhang XW, Li LF, Douthwaite S, Su XD, Nucleic Acids Res. 2012 Jun;40(11):5138-48. doi: 10.1093/nar/gks160. Epub 2012, Feb 22. PMID:22362734
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (429 Kb) [Save to disk]
  • Biological Unit Coordinates (3v97.pdb1.gz) 216 Kb
  • Biological Unit Coordinates (3v97.pdb2.gz) 209 Kb
  • LPC: Ligand-Protein Contacts for 3V97
  • CSU: Contacts of Structural Units for 3V97
  • Structure Factors (1464 Kb)
  • Retrieve 3V97 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3V97 from S2C, [Save to disk]
  • Re-refined 3v97 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3V97 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3v97] [3v97_A] [3v97_B]
  • SWISS-PROT database:
  • Domain found in 3V97: [THUMP ] by SMART

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