3VBI	Transferase	date	Jan 02, 2012
title	Crystal Structure Of Antd, An N-Acyltransferase From Bacillu In Complex With Dtdp-4-Amino-4,6-Dideoxyglucose And Coenzym
authors	R.L.Kubiak, H.M.Holden
compound		source
Molecule: Galactoside O-Acetyltransferase Chain: A, C, E Synonym: Antd Ec: 2.3.1.18 Engineered: Yes		Organism_scientific: Bacillus Cereus Organism_taxid: 699184 Strain: Sj1 Gene: Antd, Bcsj1_02085 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta2 De3 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28
symmetry	Space Group: P 41	R_factor 0.198 R_Free 0.245
crystal cell	length a length b length c angle alpha angle beta angle gamma 71.115 71.115 138.179 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	0FX, BCT, CL, COA	enzyme	Transferase E.C.2.3.1.18 BRENDA
Gene	BCSJ1
Gene Ontology	Chain Function Process Component A, C, E
Primary reference	Structural Studies on AntD: an N-Acyltransferase Involved in the Biosynthesis of D-Anthrose., Kubiak RL, Holden HM, Biochemistry. 2012 Jan 4. PMID:22220494

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk] Biological Unit Coordinates (3vbi.pdb1.gz) 97 Kb LPC: Ligand-Protein Contacts for 3VBI CSU: Contacts of Structural Units for 3VBI Structure Factors (918 Kb) Retrieve 3VBI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3VBI from S2C, [Save to disk] Re-refined 3vbi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3VBI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3VBI

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3VBI, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3vbi] [3vbi_A] [3vbi_C] [3vbi_E] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 3VBI

Community annotation for 3VBI at PDBWiki (http://pdbwiki.org)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---