3VYT date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, MG, SF4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


B


C


Primary referenceCrystal Structures of the HypCD Complex and the HypCDE Ternary Complex: Transient Intermediate Complexes during [NiFe] Hydrogenase Maturation., Watanabe S, Matsumi R, Atomi H, Imanaka T, Miki K, Structure. 2012 Oct 30. pii: S0969-2126(12)00371-1. doi:, 10.1016/j.str.2012.09.018. PMID:23123111
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk]
  • Biological Unit Coordinates (3vyt.pdb1.gz) 234 Kb
  • LPC: Ligand-Protein Contacts for 3VYT
  • CSU: Contacts of Structural Units for 3VYT
  • Structure Factors (1236 Kb)
  • Retrieve 3VYT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 3VYT from S2C, [Save to disk]
  • Re-refined 3vyt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 3VYT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [3vyt] [3vyt_A] [3vyt_B] [3vyt_C]
  • SWISS-PROT database:

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