3W57	Lipid Binding Protein	date	Jan 24, 2013
title	Structure Of A C2 Domain
authors	D.A.K.Traore, J.C.Whisstock
compound		source
Molecule: C2 Domain Protein Chain: A, B Fragment: Unp Residues 21-129 Synonym: Smc2p1 Engineered: Yes		Organism_scientific: Scophthalmus Maximus Organism_common: Turbot Organism_taxid: 52904 Gene: C2p1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Shuffle
symmetry	Space Group: P 1 21 1	R_factor 0.159 R_Free 0.182
crystal cell	length a length b length c angle alpha angle beta angle gamma 43.803 52.751 49.055 90.00 107.15 90.00
method	X-Ray Diffraction	resolution	1.66 Å
ligand	CA	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Defining the interaction of perforin with calcium and the phospholipid membrane., Traore DA, Brennan AJ, Law RH, Dogovski C, Perugini MA, Lukoyanova N, Leung EW, Norton RS, Lopez JA, Browne KA, Yagita H, Lloyd GJ, Ciccone A, Verschoor S, Trapani JA, Whisstock JC, Voskoboinik I, Biochem J. 2013 Sep 27. PMID:24070258

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk] Biological Unit Coordinates (3w57.pdb1.gz) 23 Kb Biological Unit Coordinates (3w57.pdb2.gz) 23 Kb LPC: Ligand-Protein Contacts for 3W57 CSU: Contacts of Structural Units for 3W57 Structure Factors (1295 Kb) Retrieve 3W57 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3W57 from S2C, [Save to disk] Re-refined 3w57 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3W57 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3W57

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3W57, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3w57_A] [3w57_B] [3w57] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3W57: [C2 ] by SMART

Other resources with information on 3W57

Community annotation for 3W57 at PDBWiki (http://pdbwiki.org)

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