3WW5	Hydrolase	date	Jun 17, 2014
title	Crystal Structure Of Hen Egg White Lysozyme Mutant N46ed52s
authors	Y.Abe, M.Kubota, Y.Ito, T.Imoto, T.Ueda
compound		source
Molecule: Lysozyme C Chain: A Fragment: Unp Residues 19-147 Synonym: 1,4-Beta-N-Acetylmuramidase C, Allergen Gal D Iv Ec: 3.2.1.17 Engineered: Yes Mutation: Yes		Organism_scientific: Gallus Gallus Organism_common: Bantam,Chickens Organism_taxid: 9031 Gene: Lyz Expression_system: Pichia Pastoris Expression_system_taxid: 4922 Expression_system_strain: X-33 Expression_system_vector_type: Plasmid Expression_system_plasmid: Ppicz-Alfa
symmetry	Space Group: P 43 21 2	R_factor 0.190 R_Free 0.222
crystal cell	length a length b length c angle alpha angle beta angle gamma 76.056 76.056 36.764 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.53 Å
ligand	CL	enzyme	Hydrolase E.C.3.2.1.17 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Effect on catalysis by replacement of catalytic residue from hen egg white lysozyme to Venerupis philippinarum lysozyme., Abe Y, Kubota M, Takazaki S, Ito Y, Yamamoto H, Kang D, Ueda T, Imoto T, Protein Sci. 2016 Jun 13. doi: 10.1002/pro.2966. PMID:27291073

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk] Biological Unit Coordinates (3ww5.pdb1.gz) 22 Kb LPC: Ligand-Protein Contacts for 3WW5 CSU: Contacts of Structural Units for 3WW5 Structure Factors (269 Kb) Retrieve 3WW5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 3WW5 from S2C, [Save to disk] Re-refined 3ww5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 3WW5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 3WW5

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 3WW5, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [3ww5_A] [3ww5] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 3WW5: [LYZ1 ] by SMART

Other resources with information on 3WW5

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